Publications
As the NBI grows and participates across multiple projects, we will continue to add publications to this page. This section will be representative of the work which contained a significant contribution from the NBI to the research. However, we encourage all potential collaborators to utilize our service regardless of the level of involvement desired.
Jeremy Day lab:
- Katherine E. Savell*, Jennifer J. Tuscher*, Morgan E. Zipperly*, Corey G. Duke*, Robert A.Phillips III*, Allison J. Bauman, Saakshi Thukral, Faraz A. Sultan, Nicholas A. Goska, Lara Ianov, Jeremy J. Day. A dopamine-induced gene expression signature regulates neuronal function and cocaine response Science Advances, June, 2020 doi: 10.1126/sciadv.aba4221
R Shiny app linked to the publication above:
https://day-lab.shinyapps.io/ratlas/
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Morgan E. Zipperly, Faraz A. Sultan, Guan-En Graham, Andrew C. Brane, Natalie A. Simpkins, Nancy V. N. Carullo, Lara Ianov, Jeremy J. Day. Regulation of dopamine-dependent transcription and cocaine action by Gadd45b Neuropsychopharmacology. doi: https://doi.org/10.1038/s41386-020-00828-z
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Nancy V. N. Carullo, Robert A. Phillips III, Rhiana C. Simon, Salomon A. Roman Soto, Jenna E. Hinds, Aaron J. Salisbury, Jasmin S. Revanna, Kendra D. Bunner, Lara Ianov, Faraz A. Sultan, Katherine E. Savell, Charles A. Gersbach, Jeremy J. Day Enhancer RNAs predict enhancer-gene regulatory links and are critical for enhancer function in neuronal systems. Nucleic Acids Research. doi: https://doi.org/10.1093/nar/gkaa671
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Katherine E. Savell, Svitlana V. Bach, Morgan E. Zipperly, Jasmin S. Revanna, Nicholas A. Goska, Jennifer J. Tuscher, Corey G. Duke , Faraz A. Sultan, Julia N. Burke, Derek Williams, Lara Ianov, Jeremy J. Day. A neuron-optimized CRISPR/dCas9 activation system for robust and specific gene regulation. eNeuro 2019 doi: https://doi.org/10.1523/ENEURO.0495-18.2019
UAB News press release - Feb 25, 2019
Farah Lubin lab:
- Richard G Sanchez, Ryley R Parrish, Megan C Rich, William M Webb, Roxanne M Lockhart, Kazuhito Nakao, Lara Ianov, Susan C Buckingham, Mark Cunningham, Devin R Broadwater, Alistar Jenkins, Nihal C De Lanerolle, Tore Eid, Kristen Riley, Farah D Lubin. Human and Rodent Temporal Lobe Epilepsy is Characterized by Changes in O-GlcNAc Homeostasis that can be Reversed to Dampen Epileptiform Activity. Neurobiology of Disease 2019; doi: https://doi.org/10.1016/j.nbd.2019.01.001
Matthew Alexander lab:
- Andrea L. Reid, Yimin Wang, Adrienne Samani, Rylie M. Hightower, Michael A. Lopez, Shawn R. Gilbert, Lara Ianov, David K. Crossman, Louis J. Dell’Italia, Douglas P. Millay, Thomas van Groen, Ganesh V. Halade, Matthew S. Alexander. DOCK3 is a dosage-sensitive regulator of skeletal muscle and Duchenne muscular dystrophy-associated pathologies. Human Molecular Genetics. doi: https://doi.org/10.1093/hmg/ddaa173
Randall Davis lab:
- Kazuhito Honjo, Woong-Jai Won, Rodney G. King, Lara Ianov, David K. Crossman, Juliet L. Easlick, Mikhail A. Shakhmatov, Mohamed Khass, Andre M. Vale, Robert P. Stephan, Ran Li and Randall S. Davis. Fc Receptor-Like 6 (FCRL6) Discloses Progenitor B Cell Heterogeneity That Correlates With Pre-BCR Dependent and Independent Pathways of Natural Antibody Selection. Frontiers in Immunology 2020; doi: https://doi.org/10.3389/fimmu.2020.00082
Alecia Gross - CIRC Pilot study:
- Katie L. Bales*, Lara Ianov*, Andrew J. Kennedy, J. David Sweatt, Alecia K. Gross. Autosomal dominant retinitis pigmentosa rhodopsin mutant Q344X drives specific alterations in chromatin complex gene transcription. Molecular Vision 2018; 24:153-164.
McKnight Inter-Institute collaborative publication:
- Lara Ianov, Matt De Both , Monica K. Chawla , Asha Rani , Andrew J. Kennedy, Ignazio Piras, Jeremy J. Day, Ashley Siniard, Ashok Kumar, J. David Sweatt, Carol A. Barnes, Matthew J. Huentelman, Thomas C. Foster. Hippocampal Transcriptomic Profiles: Subfield Vulnerability to Age and Cognitive Impairment. Frontiers in aging neuroscience 2017; doi: https://doi.org/10.3389/fnagi.2017.00383